p-value: | 1e-9 |
log p-value: | -2.229e+01 |
Information Content per bp: | 1.825 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 9.21% |
Number of Background Sequences with motif | 90.2 |
Percentage of Background Sequences with motif | 0.20% |
Average Position of motif in Targets | 88.0 +/- 47.3bp |
Average Position of motif in Background | 98.0 +/- 66.3bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.29 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
MA0060.2_NFYA/Jaspar
Match Rank: | 1 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TCACCAATCAKC----- TGGACCAATCAGCACTCT |
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MA0502.1_NFYB/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TCACCAATCAKC AAATGGACCAATCAG- |
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POL004.1_CCAAT-box/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCACCAATCAKC ACTAGCCAATCA-- |
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PH0107.1_Msx2/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCACCAATCAKC--- GAAGACCAATTAGCGCT |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCACCAATCAKC GYCATCMATCAT- |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TCACCAATCAKC TCATCAATCA-- |
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NFY(CCAAT)/Promoter/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCACCAATCAKC -AGCCAATCGG- |
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MA0070.1_PBX1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TCACCAATCAKC CCATCAATCAAA |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCACCAATCAKC TGACCT------ |
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TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCACCAATCAKC-- TGACCTTTGACCTC |
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