Information for motif21


Reverse Opposite:

p-value:1e-3
log p-value:-8.333e+00
Information Content per bp:1.774
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif28.95%
Number of Background Sequences with motif6090.7
Percentage of Background Sequences with motif13.21%
Average Position of motif in Targets99.8 +/- 55.4bp
Average Position of motif in Background101.0 +/- 66.9bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.45
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0133.1_BRCA1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GWGTTGTA
GTGTTGN-

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GWGTTGTA----
TGCGGAGTGGGACTGG

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GWGTTGTA------
AGNGTTCTAATGANN

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GWGTTGTA--
GGGAATTGTAGT

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GWGTTGTA-----
NNNTGTTGTTGTTNG

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GWGTTGTA--
GCGGAGGTGTCGCCTC

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GWGTTGTA-
NATGTTGCAA

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GWGTTGTA-------
NNANTTTTATTGGNNN

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GWGTTGTA
GTTTGTT-

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GWGTTGTA----
GTNTTGTTGTGANNT