Information for motif14


Reverse Opposite:

p-value:1e-4
log p-value:-1.132e+01
Information Content per bp:1.867
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif83.2
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets101.1 +/- 57.9bp
Average Position of motif in Background100.0 +/- 69.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0009.1_T/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGSTARGKGT---
--CTAGGTGTGAA

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGSTARGKGT------
GCGGAGGTGTCGCCTC

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGSTARGKGT
CAGGTAAGTAT

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGSTARGKGT--
----AGGTGTCA

MA0057.1_MZF1_5-13/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGSTARGKGT--
--GGAGGGGGAA

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGSTARGKGT-------
GGCGAGGGGTCAAGGGC

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CGSTARGKGT----
----AGGTGTGAAM

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGSTARGKGT
--CTAATKGV

MA0124.1_NKX3-1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGSTARGKGT
---TAAGTAT

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGSTARGKGT-----
NTNNTTAAGTGGNTNAN