cmd = /osc-fs_home/m.lizio/data_osc-lm/Insulin_chipseq/IDR_results_resubmission_sept2014/PAX6_reproducible_peaks_0.1.bed hg19 /osc-fs_home/m.lizio/data_osc-lm/Insulin_chipseq/HOMER_motifs_all_peaks_20140929/PAX6_reproducible_peaks_0.1_motifResults -mask -mknown /home/m.lizio/HOMER/marina.known.motifs