MacroAPE 1083:Motif CAAGTNNCA
From FANTOM5_SSTAR
Full Name: motif_CAAGTNNCA
Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
tin#MA0247.1 | 2 | 0.00836871 | 3.98351 | 1 | 6 | CAAGTAACA | CTCAAGTG | + |
ceh-22#MA0264.1 | 3 | 0.0100569 | 4.7871 | 1 | 8 | CAAGTAACA | TTTCAAGTGGT | - |
Six4#MA0204.1 | -3 | 0.0110704 | 5.26949 | 1 | 6 | CAAGTAACA | GTATCA | - |
vnd#MA0253.1 | 3 | 0.0126157 | 6.00506 | 1 | 6 | CAAGTAACA | TTTCAAGTG | + |