FFCP PHASE1:Hg19::chr12:66218598..66218645,+
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| Short description: | p2@HMGA2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_HMGA2_5end |
| Coexpression cluster: | C749_Wilms_rhabdomyosarcoma_medulloblastoma_fibrous_retinoblastoma_endometrial_schwannoma |
| Association with transcript: | 7bp_to_ENST00000545998_5end |
| EntrezGene: | HMGA2 |
| HGNC: | 5009 |
| UniProt: | NA |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p2@HMGA2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 2.44e-32 | 250 |
| muscle precursor cell | 2.62e-18 | 58 |
| myoblast | 2.62e-18 | 58 |
| multi-potent skeletal muscle stem cell | 2.62e-18 | 58 |
| muscle cell | 4.14e-17 | 55 |
| electrically responsive cell | 5.31e-17 | 61 |
| electrically active cell | 5.31e-17 | 61 |
| mesodermal cell | 2.98e-15 | 121 |
| epithelial cell | 9.36e-15 | 253 |
| smooth muscle cell | 1.35e-13 | 43 |
Showing 1 to 10 of 15 entries
| Ontology term | p-value | n |
|---|---|---|
| multilaminar epithelium | 5.27e-22 | 83 |
| unilaminar epithelium | 1.23e-20 | 148 |
| epithelial vesicle | 6.87e-20 | 78 |
| mesenchyme | 1.90e-19 | 160 |
| entire embryonic mesenchyme | 1.90e-19 | 160 |
| somite | 8.93e-19 | 71 |
| presomitic mesoderm | 8.93e-19 | 71 |
| presumptive segmental plate | 8.93e-19 | 71 |
| dermomyotome | 8.93e-19 | 71 |
| trunk paraxial mesoderm | 8.93e-19 | 71 |
Showing 1 to 10 of 49 entries
