FFCP PHASE1:Hg19::chr12:66218255..66218304,+
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| Short description: | p3@HMGA2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_HMGA2_5end |
| Coexpression cluster: | C749_Wilms_rhabdomyosarcoma_medulloblastoma_fibrous_retinoblastoma_endometrial_schwannoma |
| Association with transcript: | 15bp_to_ENST00000354636, ENST00000393578, ENST00000425208, ENST00000536545, ENST00000537275, ENST00000537429, NM_003483, NM_003484, uc001sss.1, uc001sst.1, uc001ssu.1, uc001ssv.2, uc001ssw.1, uc001ssx.2, uc010ssv.1_5end |
| EntrezGene: | HMGA2 |
| HGNC: | 5009 |
| UniProt: | Q1M182Q1M188Q1M186F5H6H0Q1M187Q1M185P52926 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p3@HMGA2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 4.59e-30 | 250 |
| muscle precursor cell | 1.94e-16 | 58 |
| myoblast | 1.94e-16 | 58 |
| multi-potent skeletal muscle stem cell | 1.94e-16 | 58 |
| epithelial cell | 2.01e-16 | 253 |
| mesodermal cell | 2.74e-15 | 121 |
| muscle cell | 3.56e-15 | 55 |
| electrically responsive cell | 7.49e-15 | 61 |
| electrically active cell | 7.49e-15 | 61 |
| smooth muscle cell | 2.08e-11 | 43 |
Showing 1 to 10 of 15 entries
| Ontology term | p-value | n |
|---|---|---|
| multilaminar epithelium | 4.58e-20 | 83 |
| unilaminar epithelium | 1.44e-19 | 148 |
| epithelial vesicle | 2.50e-18 | 78 |
| mesenchyme | 1.34e-17 | 160 |
| entire embryonic mesenchyme | 1.34e-17 | 160 |
| cell layer | 1.56e-16 | 309 |
| somite | 1.92e-16 | 71 |
| presomitic mesoderm | 1.92e-16 | 71 |
| presumptive segmental plate | 1.92e-16 | 71 |
| dermomyotome | 1.92e-16 | 71 |
Showing 1 to 10 of 58 entries
