Referring to the database

Currently, we provide CGIs for linking to the database with the following IDs

If you would like to link the database, you should use the following URLs in your documents.


Clone ID (cloneid)

https://fantom.gsc.riken.jp/3/db/link/cloneid.cgi?id=(Clone ID)
Example: https://fantom.gsc.riken.jp/3/db/link/cloneid.cgi?id=B230323M20

(FANTOM 3) Sequence ID (seqid)

https://fantom.gsc.riken.jp/3/db/link/seqid.cgi?id=((FANTOM 3) Sequence ID)
Example: https://fantom.gsc.riken.jp/3/db/link/seqid.cgi?id=53302

Rearray ID (rearrayid)

https://fantom.gsc.riken.jp/3/db/link/rearrayid.cgi?id=(Rearray ID)
Example: https://fantom.gsc.riken.jp/3/db/link/rearrayid.cgi?id=PX00971B23

DDBJ Accession in HTC (accession)

https://fantom.gsc.riken.jp/3/db/link/accession.cgi?id=(DDBJ Accession in HTC )
Example: https://fantom.gsc.riken.jp/3/db/link/accession.cgi?id=AK045924

DDBJ Accessions in EST (estaccession)

https://fantom.gsc.riken.jp/3/db/link/estaccession.cgi?id=(DDBJ Accessions in EST)
Example: https://fantom.gsc.riken.jp/3/db/link/estaccession.cgi?id=BB311297 BB311297

(FANTOM 2) Sequence ID (f2seqid)

https://fantom.gsc.riken.jp/3/db/link/f2seqid.cgi?id=((FANTOM 2) Sequence ID)
Example: https://fantom.gsc.riken.jp/3/db/link/f2seqid.cgi?id=53302

(FANTOM 1) Sequence ID (f1seqid)

https://fantom.gsc.riken.jp/3/db/link/f1seqid.cgi?id=((FANTOM 1) Sequence ID)
Example: https://fantom.gsc.riken.jp/3/db/link/f1seqid.cgi?id=1

MGI Clone Accession (mgiclone)

https://fantom.gsc.riken.jp/3/db/link/mgiclone.cgi?id=(MGI Clone Accession)
Example: https://fantom.gsc.riken.jp/3/db/link/mgiclone.cgi?id=MGI:2411305

MGI Marker Accession (mgimarker)

https://fantom.gsc.riken.jp/3/db/link/mgimarker.cgi?id=(MGI Marker Accession)
Example: https://fantom.gsc.riken.jp/3/db/link/mgimarker.cgi?id=MGI:107417

Any ID type

https://fantom.gsc.riken.jp/3/db/link/id.cgi?id=(any ID)
Example: https://fantom.gsc.riken.jp/3/db/link/id.cgi?id=B230323M20

Multiple identifiers

You can write multiple identifiers in an "id" parameter by concatenating with comma characters.
https://fantom.gsc.riken.jp/3/db/link/id.cgi?id=B230323M20,A730030D03

Menu page

RIKEN (The Institute of Physical and Chemical Research) / NTT Software Corporation.